Reorder configure macros to avoid "missing script" warning.
3 effects in this commit, with the first being the main one: 1. Fix the "`missing' script is too old or missing" warning. See: <https://lists.gnu.org/archive/html/automake/2010-08/msg00108.html> 2. By moving AC_CANONICAL_TARGET down in order, we are now able to set the directory for auxiliary scripts. For now it's still './'. I added the line "AC_CONFIG_AUX_DIR([.])" to show that the directory change is possible. 3. AC_USE_SYSTEM_EXTENSIONS includes checks from AC_PROG_CC, by moving the former macro down, we can save size in 'configure' by not generating repeated checks.
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